Residue IE Score: Monitors that all PHE, TYR, and TRP residues are scoring well.
Core Existence: Monomer: Ensures that at least 20% of the residues are buried in the core of the monomer unit.
Core Existence: Complex: Ensures that at least 35% of the residues are buried in the core of the entire complex (including the interface between monomer units).
Fragment Score: Scans for parts of your design that are unlikely to fold up naturally. Use Rebuild and Remix tools to fix these regions of your design!
Secondary Structure Design: Penalizes GLY, ALA, and PRO residues in helices and sheets.
Folding this one is like pushing a tank with my forehead.
Stopping a wiggle takes 20 seconds. I timed it! Twenty seconds from clicking Stop to actually stopping.