puzzle picture
1039: De-novo Freestyle 47: Hand-folding Round
Status: Closed

Summary

Name: 1039: De-novo Freestyle 47: Hand-folding Round
Status: Closed
Created: 01/19/2015
Points: 100
Expired: 01/26/2015 - 23:00
Difficulty: Intermediate
Description: In this de-novo freestyle puzzle, only GUI scripts are allowed and sharing has been disabled. After this puzzle expires, the puzzle will be reposted with LUA scripts and sharing enabled. The secondary structure predictions are provided on the starting model, with more details posted in the puzzle comments.
Categories: Hand-Folding, Overall, Prediction

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2Void Crushers9,39883
3Go Science9,23468
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Comments

bkoep's picture
User offline. Last seen 16 hours 15 min ago. Offline
Joined: 11/15/2012
Groups: None
Secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons