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1032: De-novo Freestyle 46: Hand-folding Round
Status: Closed

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bkoep's picture
User offline. Last seen 2 days 11 hours ago. Offline
Joined: 11/15/2012
Groups: None
Secondary structure predictions coming soon!

SS predictions from the SAM server are forthcoming, so check back soon. The starting model shows secondary structure as predicted by PSIPRED.

bkoep's picture
User offline. Last seen 2 days 11 hours ago. Offline
Joined: 11/15/2012
Groups: None
SAM secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Joined: 06/06/2013
Groups: Gargleblasters
Eek! a little big for first try at hand folding

I don't seem to have any SS predictions....or any idea what to do given some of these sequences. We need a hand fold puzzle for first timers. Totally lost

Joined: 06/06/2013
Groups: Gargleblasters
found SS when reset puzzle

there was NO SS the first time I opened this. a little overwhelming and large for a novice... Still would like a first timer only puzzle for those of us who have never hand folded. A little smaller to be managable
Thanks

Joined: 09/24/2012
Groups: Go Science
SS

is on the screen, but you wont see beautifull helixes.
Use Ideal SS tool or rebuild to form nice helixes. Then cut, move, uncut as you like to imagine a beautifull TS
There are some video to show how to do from here:
http://foldit.wikia.com/wiki/Tutorial_Puzzles

Joined: 07/21/2013
Groups: Beta Folders
can I share this?

I tried to share a version of this puzzles with my group. I could not. I noticed that there is no other shared versions of this puzzle for my group. There is no "Top evolvers" for this puzzle.

Joined: 09/24/2012
Groups: Go Science
No

Hand folding round allows no sharing.
There will be a second round with scripts and sharing allowed.
If you want, you can share a picture to your group trough group chat.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons