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Recipe: Toolbox v1.3
Created by MurloW 72 1890
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Name: Toolbox v1.3
ID: 102130
Created on: Fri, 08/12/2016 - 13:36
Updated on: Fri, 08/12/2016 - 13:36
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MurloW's picture
User offline. Last seen 4 weeks 3 days ago. Offline
Joined: 11/21/2012
v1.3

I chose to forgo the options of a fuzing threshold and length, and qStab, since it all came down to the same thing:
amount of testing after perturbations.
What I did was to add a slider, the Desperation level.

1 uses only the necessary shakes/mutates and wiggles to stabilize;
2 adds a qStab including 2 shakes and some wiggles;
3 adds the qStab and fuzes (with another 2 shakes/mutates) when after stabilizing: (current score) >= best score + (best score / 220);
4 adds the qStab and fuzes (with a 3rd shake/mutate) when after stabilizing: (current score) >= (best score) - (best score / 220 ).
You can alter the magic number of 220 on line #9 from the top.

also:
added remix to random among selected
improved bands handling and added related options
split dialog into Actions and Options ( tested on a 1024*768 resolution )
various minor stuff

see bottom of code for details.

TheGejr's picture
User offline. Last seen 1 year 27 weeks ago. Offline
Joined: 10/27/2015
great

great

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, RosettaCommons