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| Vote | # | Title | Status | Type | Submitter | Replies | Last updated |
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| 800-0 | Do not fade menus and windows | Open | Suggestion | Bletchle... | 12/27 01:37, Bletchle... |
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| 500-0 | Apple user interface may be different than PC while instructing intro level puzzles | Open | Suggestion | Bletchle... | 12/01 15:45, Bletchle... |
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| 900-0 | File handling request | Open | Suggestion | Bletchle... | 12/11 12:11, Bletchle... |
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| 500-0 | Element alignment tool | Open | Suggestion | Bletchle... | 11/23 02:15, Bletchle... |
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| 600-0 | Moderate requests for reseach assistance | Open | Suggestion | Bletchle... | 04/10 06:15, Bruno Ke... |
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| 500-0 | A rebuilt sheet should be... a straight zigzag | Open | Suggestion | Bletchle... | 10/21 11:01, jeff101 |
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| 500-0 | please implement get_sidechain_snap(<segment>) | Open | Suggestion | Bletchle... | 05/16 05:41, Enzyme |
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| 900-0 | DEVPREV; animation of HBonds eats bandwidth | Open | Suggestion | Bletchle... | 05/06 20:43, brow42 |
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| 500-0 | Hide rest of backbone while banding to guide | Open | Suggestion | Bletchle... | 07/08 03:54, gramps |
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| 800-0 | Wiggle strength indicator does not reflect wiggle strength setting during scripts | Open | Suggestion | Bletchle... | 07/08 06:49, Bruno Ke... |
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| 100-0 | Track list should refresh with button and track change | Open | Suggestion | Bletchle... | 06/30 06:47, bertro |
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| 300-0 | Loading design puzzles slow | Open | Suggestion | Bletchle... | 02/03 19:26, Susume |
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| 400-0 | Please list science progress on the webpage. "PROGRESS" | Open | Suggestion | Bletchle... | 12/15 09:03, inkycatz |
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| 800-0 | ED cloud Z-depth color change | Open | Suggestion | Bletchle... | 12/05 16:12, Hanto_FZ... |
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| 100-71 | Open source | Open | Suggestion | dennisn | 05/14 00:04, Barbarrosa |
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| 300-0 | Show bondable atoms even when existing bonds are not shown. | Open | Suggestion | Crashgua... | 04/05 00:54, Timo van... |
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| 100-0 | Unsharing does not work | Open | Suggestion | Crashgua... | 03/10 03:27, Wipf |
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| 100-0 | Bonds table for camparison | Open | Suggestion | Crashgua... | 06/14 02:04, Anonymous |
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| 800-0 | Extra window for chat and notifications | Open | Suggestion | Crashgua... | 08/06 05:52, Crashgua... |
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| 400-0 | Navigating in depth | Open | Suggestion | Crashgua... | 05/30 08:54, Crashgua... |
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