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| Vote | # | Title | Status | Type | Submitter | Replies | Last updated |
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| 500-0 | In Density Puzzles, Align/Refined buttons will «eat up» one undo step when activated or... | Open | Bug | bertro | 12/20 21:47, bertro |
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| 700-0 | Cutpoint update crashes on Linux | Open | Bug | BitSpawn | 01/02 23:09, BitSpawn |
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| 700-0 | Tutorial 8-2 crashes on shake. | Open | Bug | Anfinsen... | 09/03 22:08, Susume |
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| 800-0 | New devprev | Open | Bug | Mike Cas... | 03/04 19:28, Hanto |
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| 200-0 | Group scores mismatch from Top Groups page and individual Group's pages | Open | Bug | pauldunn | 01/19 16:26, Bruno Ke... |
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| 300-0 | Tutorial: Cut and Paste 6-2 | Open | Bug | MikeCass... | 03/20 02:53, MikeCass... |
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| 900-0 | Devprev: minimizing moves cookbook and behavior box | Open | Bug | Timo van... | 01/16 06:54, Timo van... |
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| 300-0 | Puzzle 1355. Auto-structures thinks green segment is part of a helix | Open | Bug | tokens | 03/22 00:23, Formula350 |
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| 500-0 | Rama map broken on 1311 | Open | Bug | Susume | 12/05 19:22, bkoep |
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| 700-0 | 897 crashes often | Open | Bug | karstenw | 05/22 18:25, wisky |
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| 700-0 | Fourth crash on 1514 | Open | Bug | alcor29 | 05/01 17:33, alcor29 |
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| 100-0 | Latest update forgets what puzzle was played in the previous instance of the game | Open | Bug | Timo van... | 12/20 00:28, jflat06 |
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| 300-0 | Serious issues rebuilding helices | Open | Bug | auntdeen | 10/31 04:14, auntdeen |
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| 500-0 | Locked solution, W-all does nothing. | Open | Bug | bertro | 10/21 22:00, bertro |
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| 700-0 | Since Updated, Every time it goes to new puzzle it crashes | Open | Bug | bcdclaire | 11/22 04:17, MalcolmW |
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| 700-0 | 1311 Crash | Open | Bug | TomTaylor | 12/08 13:07, actiasluna |
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| 800-0 | Shift Q is broken since last update (Win 7 dev/main, Mac) | Open | Bug | Susume | 02/13 01:13, bkoep |
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| 300-0 | Memory leak? linux beta | Open | Bug | wudoo | 09/29 01:16, lensman3 |
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| 300-0 | Evolving Issue | Open | Bug | brgreening | 02/26 13:43, Bruno Ke... |
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| 900-0 | Losing the contact map (devprev, win) | Open | Bug | Susume | 10/16 15:04, inkycatz |
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