puzzle picture
925: CASP11 Target Tc785: True Contacts
Status: Closed


Name: 925: CASP11 Target Tc785: True Contacts
Status: Closed
Created: 06/25/2014
Points: 100
Expired: 07/01/2014 - 10:00
Difficulty: Intermediate
Description: For this target, the CASP11 organizers have provided additional "correct" contact predictions, which we have combined with the sparse data contacts from Puzzle 920b. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 985 possible points from the filter. Players will NOT be able to load in solutions from previous puzzles. See the puzzle comments for secondary structure predictions!
Categories: CASP11, Overall, Predicted Contacts, Prediction

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bkoep's picture
User offline. Last seen 6 hours 47 min ago. Offline
Joined: 11/15/2012
Groups: Foldit Staff
Secondary structure predictions

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons