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920: CASP11 Target Ts785: Sparse Data Contacts
Status: Closed

Summary

Name: 920: CASP11 Target Ts785: Sparse Data Contacts
Status: Closed
Created: 06/18/2014
Points: 0
Expired: 06/25/2014 - 23:00
Difficulty: Intermediate
Description: For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are factored directly into your score in this puzzle, and contribute to the "Backbone" subscore. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.
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Comments

bkoep's picture
User offline. Last seen 11 hours 16 min ago. Offline
Joined: 11/15/2012
Groups: Foldit Staff
Secondary structure predictions

Here is the sequence logo predicted by the SAM server:

NOTE: Numbering is off as the first 2 residues were trimmed by CASP
H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

bkoep's picture
User offline. Last seen 11 hours 16 min ago. Offline
Joined: 11/15/2012
Groups: Foldit Staff
Puzzle reposted

This puzzle has been prematurely closed and reposted as Puzzle 920b, due to errors in the contact map.

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