puzzle picture
600: CASP10 Target T0743
Status: Closed

Soloists

RankPlayerGroupScorePoints
151FScot 69 1797  9,1811
152giobrach 69 1797  9,1041
153nullenigma 69 1797  9,0801
154sbea3 69 1797  9,0381
155phallicies 69 1797  8,9831
156Mozz97 69 1797  8,7341
157CoachB 69 1797  8,6931
158Ditti123 69 1797 7Monkeys8,6861
159miss wanr 69 1797 foldeRNA8,6691
160smileyfuntime 69 1797  8,6301
161spirogyra 69 1797  8,6051
162lboninsouza 69 1797  8,5931
163KingLear 69 1797  8,5341
164AIDA64 69 1797  8,5091
165RandyFithian 69 1797  8,4701
166deLaCeiba 69 1797  8,4671
167ch00215 69 1797  8,4321
168Lumir 69 1797 Czech National Team8,3631
169ForTex 69 1797  8,2291
170crawlee34225 69 1797  8,1721
171weurhartdezirez 69 1797 Freedom Folders8,1541
172BoboMcBob 69 1797  8,1471
173JameAlec 69 1797  8,1411
174richard c 69 1797  8,1241
175armadillo314 69 1797  8,1231


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beta_helix's picture
User offline. Last seen 9 hours 32 min ago. Offline
Joined: 05/09/2008
Groups: None
Additional info about this CASP target

Here is the CASP link for this target (showing the amino acid sequence):
http://predictioncenter.org/casp10/target.cgi?id=168
____________________________________________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 22, 28, 78, 91 & 94 are highly predicted to be in a helix. However, the Leucines at residues 109 & 144 are predicted to be in a sheet.
____________________________________________________

Link to template PDBs:

http://www.pdb.org/pdb/explore/explore.do?structureId=3fh1
http://www.pdb.org/pdb/explore/explore.do?structureId=2cw9
http://www.pdb.org/pdb/explore/explore.do?structureId=3k7c

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