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560: Quick CASP10 T0660 Puzzle
Status: Closed
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Evolvers
1 | dembones 46 1458 | Contenders | 10,948 | 100 | 2 | Bletchley Park 8 8 | Contenders | 10,946 | 98 | 3 | mimi 46 1458 | Contenders | 10,927 | 95 | 4 | SimplySue 46 1458 | Anthropic Dreams | 10,912 | 93 | 5 | BitSpawn 46 1458 | Anthropic Dreams | 10,912 | 91 | 6 | smilingone 46 1458 | Go Science | 10,911 | 88 | 7 | pauldunn 46 1458 | Go Science | 10,909 | 86 | 8 | mbinfield 46 1458 | Go Science | 10,907 | 84 | 9 | Wildcat777 46 1458 | Void Crushers | 10,897 | 82 | 10 | kabubi 46 1458 | Void Crushers | 10,895 | 80 | 11 | packer 46 1458 | Go Science | 10,888 | 77 | 12 | B_2 46 1458 | Go Science | 10,888 | 75 | 13 | lamoille 46 1458 | Anthropic Dreams | 10,853 | 73 | 14 | jamiexq 16 36 | Anthropic Dreams | 10,852 | 71 | 15 | sirenbrian2 46 1458 | Anthropic Dreams | 10,846 | 70 | 16 | keithv 46 1458 | Anthropic Dreams | 10,844 | 68 | 17 | alwen 46 1458 | Anthropic Dreams | 10,841 | 66 | 18 | Mike Cassidy 46 60 | Void Crushers | 10,836 | 64 | 19 | spmm 46 1458 | Void Crushers | 10,821 | 62 | 20 | bertro 46 1458 | foldeRNA | 10,774 | 61 | 21 | JasperD 46 1458 | foldeRNA | 10,771 | 59 | 22 | krulon 46 1458 | foldeRNA | 10,762 | 57 | 23 | Ch Garnier 46 1458 | L'Alliance Francophone | 10,756 | 56 | 24 | BootsMcGraw 10 7 | Contenders | 10,752 | 54 | 25 | phi16 9 29 | Anthropic Dreams | 10,749 | 53 | Need this puzzle? Log in to download.
Comments
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Below is a screenshot of all the Baker-RosettaServer, Quark, and Zhang-Server predictions.
The last 50 residues are shown as lines so that you can see how conserved the rest of the protein is.
The key to this CASP10 target will be figuring out where the last 50 residues go, so good luck!
And here is the link to secondary structure predictions for this target:
http://fold.it/portal/node/992632#comment-17334
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You might be able to tell from the above screenshot that all the servers have tried to form a helix (or 2 helices) with the last 50 residues.
Here is a hint to easily make a helix (if that is what you want to attempt):
The rebuild tool takes structure assignment into account, so you can set the secondary structure to helix and then Rebuild. Foldit will then make a helix out of that region.