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550: Pre-CASP blind Alignment Puzzle 2
Status: Closed
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Evolvers
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| 1 | gmn 4 5 | Anthropic Dreams | 10,617 | 100 | | 2 | ErichVonSterich 46 1458 | Anthropic Dreams | 10,614 | 99 | | 3 | lamoille 46 1458 | Anthropic Dreams | 10,586 | 97 | | 4 | phi16 9 29 | Anthropic Dreams | 10,585 | 95 | | 5 | keithv 46 1458 | Anthropic Dreams | 10,585 | 93 | | 6 | barbaranne 46 1458 | Anthropic Dreams | 10,584 | 92 | | 7 | meatexplosion 46 1458 | Anthropic Dreams | 10,584 | 90 | | 8 | BitSpawn 46 1458 | Anthropic Dreams | 10,583 | 88 | | 9 | alwen 46 1458 | Anthropic Dreams | 10,583 | 87 | | 10 | kabubi 46 1458 | Void Crushers | 10,570 | 85 | | 11 | mat747 46 1458 | Void Crushers | 10,568 | 84 | | 12 | jamiexq 16 36 | Anthropic Dreams | 10,546 | 82 | | 13 | Bletchley Park 8 8 | Contenders | 10,544 | 80 | | 14 | smilingone 46 1458 | Go Science | 10,537 | 79 | | 15 | B_2 46 1458 | Go Science | 10,536 | 77 | | 16 | Hanto_FZ140E_4G 46 1458 | Go Science | 10,536 | 76 | | 17 | mbinfield 46 1458 | Go Science | 10,536 | 75 | | 18 | martinzblavy 46 1458 | Contenders | 10,532 | 73 | | 19 | mimi 46 1458 | Contenders | 10,531 | 72 | | 20 | dembones 46 1458 | Contenders | 10,527 | 70 | | 21 | pauldunn 46 1458 | Go Science | 10,526 | 69 | | 22 | bertro 46 1458 | foldeRNA | 10,512 | 68 | | 23 | harvardman 46 416 | Anthropic Dreams | 10,508 | 66 | | 24 | krulon 46 1458 | foldeRNA | 10,503 | 65 | | 25 | micheldeweerd 46 1458 | foldeRNA | 10,497 | 64 | Need this puzzle? Log in to download.
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Here is the sequence logo predicted by the SAM server.
H = helix
E = sheet
C = loop (or coil)
The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.
For example, the Phenylalanine at residue 25 is mostly predicted to be part of a sheet. However, the Phenylalanine at residue 51 is predicted to be anything.