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550: Pre-CASP blind Alignment Puzzle 2
Status: Closed
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Groups
| 1 | Anthropic Dreams | 10,617 | 100 | | 2 | Void Crushers | 10,570 | 81 | | 3 | Contenders | 10,544 | 65 | | 4 | Go Science | 10,537 | 52 | | 5 | foldeRNA | 10,512 | 41 | | 6 | Russian team | 10,423 | 32 | | 7 | L'Alliance Francophone | 10,421 | 25 | | 8 | Another Hour Another Point | 10,393 | 19 | | 9 | FoldIt@Netherlands | 10,345 | 15 | | 10 | Gargleblasters | 10,336 | 11 | | 11 | SETI.Germany | 10,323 | 8 | | 12 | Nerdfighters | 10,229 | 6 | | 13 | Team Hungary | 10,155 | 5 | | 14 | E?????! Heureka! | 10,025 | 4 | | 15 | Mojo Risin' | 9,826 | 3 | | 16 | Freedom Folders | 9,805 | 2 | | 17 | Richard Dawkins Foundation | 9,734 | 1 | | 18 | Newton's Cradle | 9,550 | 1 | | 19 | Team China | 9,467 | 1 | | 20 | Atlanta | 9,381 | 1 | | 21 | xkcd | 9,300 | 1 | | 22 | BOINC@Poland | 9,246 | 1 | | 23 | Wisconsin Pride | 9,179 | 1 | | 24 | Piratenpartei Deutschland | 9,081 | 1 | | 25 | St. Mark's School of Texas Folders | 9,044 | 1 | Need this puzzle? Log in to download.
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Here is the sequence logo predicted by the SAM server.
H = helix
E = sheet
C = loop (or coil)
The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.
For example, the Phenylalanine at residue 25 is mostly predicted to be part of a sheet. However, the Phenylalanine at residue 51 is predicted to be anything.