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481: Unsolved Nanog Transcription Factor 2
Status: Closed

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beta_helix's picture
User offline. Last seen 4 hours 49 min ago. Offline
Joined: 05/09/2008
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Additional info in the blog: http://fold.it/portal/node/991003

You can see the 10 Quark Server results (where you'll find secondary structure & burial predictions) here:
http://zhanglab.ccmb.med.umich.edu/QUARK/output/Q14089/

Additional information on partial threading here:

http://fold.it/portal/node/989193#comment-9965

Please make sure to try out all 10 starting server models, since we have no clue which one is closer to the correct native structure.

spmm's picture
User offline. Last seen 9 weeks 1 day ago. Offline
Joined: 08/05/2010
Groups: Void Crushers
randomly spinning jmols

it is great that we can see the jmol for each alignment excellent in a side by side comparision - however I found that if I tried to line them up to compare them they started spinning randomly which defeated my purpose.

beta_helix's picture
User offline. Last seen 4 hours 49 min ago. Offline
Joined: 05/09/2008
Groups: None
sadly those are created by the Zhang server

we have no control over that page.

They are the same models as your starting structures, however, so you can save the starting model and load it in as a guide to compare between them.

Hopefully that helps a bit!

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