Structure Tool (useful for large proteins)

Case number:845813-986872
Topic:Game: Tools
Opened by:LavenderSky
Opened on:Thursday, October 8, 2009 - 03:41
Last modified:Monday, August 22, 2011 - 19:17

A tool that would allow the folder to choose the two end points for a helix, loop, or sheet, and have the inner section filled in automatically would be helpful, especially for large proteins.

(If this option already exists, I haven't found it yet.)

(Thu, 10/08/2009 - 03:41  |  5 comments)

Joined: 09/18/2009
Groups: SETI.Germany

You can do this with the new interface!
Click the starting segment, hold Shift,and click the ending segment.
Now, all segments in this range should be selected (thick and blue).
Now you can directly assign a new structure to the complete selection.

Joined: 09/18/2009
Groups: SETI.Germany

I forgot: Double-clicking automatically selects all the adjoining structures, which are the same.
For example,if you double-click a helix, your selection will include the whole helix, if you double-click loops, your selection will contain the whole piece of loop, ending at helixes or sheets.

Joined: 08/18/2009
Groups: None

Thank you Crashguard- that is great to know!

Joined: 09/18/2009
Groups: SETI.Germany

My pleasure.
Sperical selecting is also very interesting.

Joined: 06/17/2010
Status: Open » Closed

It is in selection interface. Closing.


Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
Supported by: DARPA, NSF, NIH, HHMI, Amazon, Microsoft, Adobe, Boehringer Ingelheim, RosettaCommons