Metrics crash in VarSolDistSasaCalculator

Case number:699969-2010790
Topic:General
Opened by:spvincent
Status:Open
Type:Bug
Opened on:Tuesday, November 17, 2020 - 01:15
Last modified:Tuesday, November 17, 2020 - 01:15

(Linux/main). Frequent random crashes: all have what seems to be same stack trace.

version: 1
{
"backtrace" : "cmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(game::application::CrashReporter::exit_callback(std::string const&, int, std::string const&)+0x2a) [0x7f7f56a7d0ba]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(game::application::terminate_handler()+0x1a5) [0x7f7f56a7d4e5]\n/lib/x86_64-linux-gnu/libstdc++.so.6(+0xaa47c) [0x7f7f5c5d547c]\n/lib/x86_64-linux-gnu/libstdc++.so.6(+0xaa4e7) [0x7f7f5c5d54e7]\n/lib/x86_64-linux-gnu/libstdc++.so.6(+0xaa799) [0x7f7f5c5d5799]\n/lib/x86_64-linux-gnu/libstdc++.so.6(+0x9e562) [0x7f7f5c5c9562]\n/lib/x86_64-linux-gnu/libstdc++.so.6(std::string::_Rep::_S_create(unsigned long, unsigned long, std::allocator const&)+0x69) [0x7f7f5c619309]\n/lib/x86_64-linux-gnu/libstdc++.so.6(std::string::_Rep::_M_clone(std::allocator const&, unsigned long)+0x22) [0x7f7f5c61a222]\n/lib/x86_64-linux-gnu/libstdc++.so.6(std::basic_string, std::allocator >::basic_string(std::string const&)+0x5c) [0x7f7f5c61a9dc]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(protocols::vardist_solaccess::VarSolDistSasaCalculator::initialize_sasa_arrays()+0x35d) [0x7f7f5865debd]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(protocols::vardist_solaccess::VarSolDistSasaCalculator::VarSolDistSasaCalculator()+0x1c8) [0x7f7f5865ea58]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(protocols::vardist_solaccess::VarSolDistSasaCalculator::clone() const+0x1c) [0x7f7f5865ebac]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(core::pose::metrics::PoseMetricContainer::clone_calculators(std::map, std::less, std::allocator > > > const&)+0xa9) [0x7f7f599f98a9]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(core::pose::metrics::PoseMetricContainer::PoseMetricContainer(core::pose::metrics::PoseMetricContainer const&)+0x59) [0x7f7f599f9ac9]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(core::pose::Pose::operator=(core::pose::Pose const&)+0x39c) [0x7f7f59529a2c]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(core::pose::Pose::Pose(core::pose::Pose const&)+0x26f) [0x7f7f5952a12f]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(interactive::application::appfilter::SasaScoreFilter::compute(core::pose::Pose const&) const+0x36) [0x7f7f56e41816]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(interactive::application::appfilter::SasaScoreFilter::apply(std::shared_ptr) const+0x31) [0x7f7f56e422c1]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(interactive::rosetta_util::Filter::apply_filter(std::shared_ptr, interactive::util::owning_ptr, bool) const+0x285) [0x7f7f570fe345]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(interactive::rosetta_util::ReferencePoseInfo::asynchronous_run_filter(interactive::util::owning_ptr, std::shared_ptr, unsigned long, std::shared_ptr, unsigned long)+0x6a) [0x7f7f5710436a]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(boost::detail::function::void_function_obj_invoker0, std::shared_ptr, unsigned long, std::shared_ptr, unsigned long), boost::_bi::list5 >, boost::_bi::value >, boost::_bi::value, boost::_bi::value >, boost::_bi::value > >, void>::invoke(boost::detail::function::function_buffer&)+0x90) [0x7f7f57109db0]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(interactive::util::Thread::thread_entry_func()+0x2d) [0x7f7f570ba7dd]\ncmp-binary-e6f5ef7a700ff98cb898d65ccf521d96/game_library.so(interactive::util::Thread::pthread_startup_helper(void*)+0x23) [0x7f7f570badd3]\n/lib/x86_64-linux-gnu/libpthread.so.0(+0x9609) [0x7f7f5404b609]\n/lib/x86_64-linux-gnu/libc.so.6(clone+0x43) [0x7f7f5c43e293]\n"
"build_id" : "20201104-a5cd429da6-linux_x64"
"crash_id" : "f737ab3c-8b2f-4df2-92ce-170f77dc543c"
"current_actions" : "MacroScriptRunnerAction"
"current_tool" : "Pull Mode"
"file" : "Uncaught exception: St9bad_alloc:0"
"machine_id" : "59cc9335-7548-495a-a39a-c3737e48e54c"
"macro_id" : "204916"
"message" : "std::bad_alloc"
"player_id" : "3010"
"puzzle_id" : "2010771"
"puzzle_running_time" : "2564"
"running_time" : "2603.18"
"timestamp" : "1605566875"
}
verify: 3b9060449656c7456a4fbf74a6204451

(Tue, 11/17/2020 - 01:15  |  0 comments)


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Developed by: UW Center for Game Science, UW Institute for Protein Design, Northeastern University, Vanderbilt University Meiler Lab, UC Davis
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