Buns filter crash

Case number:699969-2009666
Topic:General
Opened by:spvincent
Status:Open
Type:Suggestion
Opened on:Friday, May 15, 2020 - 20:09
Last modified:Friday, May 15, 2020 - 20:09

The following sequence reproducibly crashes Foldit with 1837 on Linux

1)Load a structure
2)Disable Buns filter.
3)Run buns filter.
4)Enable Buns filter.
5)Run buns filter.

Instant death on the last step

Debug.txt

version: 1
{
"backtrace" : "cmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(game::application::CrashReporter::exit_callback(std::string const&\, int\, std::string const&)+0x2a) [0x7fde331082ca]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(game::application::signal_handler(int)+0xc8) [0x7fde331083e8]\n/lib/x86_64-linux-gnu/libc.so.6(+0x46470) [0x7fde3897a470]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(protocols::toolbox::pose_metric_calculators::NumberHBondsCalculator::determine_res_to_recompute(core::pose::Pose const&\, utility::vector1 >&)+0x14a) [0x7fde3511682a]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(protocols::toolbox::pose_metric_calculators::NumberHBondsCalculator::recompute(core::pose::Pose const&)+0x260) [0x7fde35116fd0]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(core::pose::metrics::EnergyDependentCalculator::get(std::string const&\, basic::MetricValueBase&\, core::pose::Pose const&)+0x20) [0x7fde334687b0]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(core::pose::metrics::PoseMetricContainer::get(std::string const&\, std::string const&\, basic::MetricValueBase&\, core::pose::Pose const&)+0x35) [0x7fde36034a65]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(protocols::toolbox::pose_metric_calculators::BuriedUnsatisfiedPolarsCalculator::recompute(core::pose::Pose const&)+0x139) [0x7fde35108c39]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::application::appfilter::BuriedUnsatScoreFilter::buns(core::pose::Pose const&\, core::id::AtomID_Map\, bool) const+0x5fa) [0x7fde33469cea]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::application::appfilter::BuriedUnsatScoreFilter::compute(core::pose::Pose const&) const+0x487) [0x7fde3346a2c7]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::application::appfilter::BuriedUnsatScoreFilter::apply(std::shared_ptr) const+0x33) [0x7fde3346a3f3]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::rosetta_util::Filter::apply_filter(std::shared_ptr\, interactive::util::owning_ptr\, bool) const+0x285) [0x7fde33746d75]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::rosetta_util::ReferencePoseInfo::run_filter(std::shared_ptr\, unsigned long) const+0x94) [0x7fde3374bf34]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(standalone::application::FilterWidget::run_filter_internal(unsigned long)+0xa2) [0x7fde33135cb2]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(standalone::application::FilterWidget::run_filter_callback(unsigned long)+0xe) [0x7fde33135dde]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(boost::detail::function::void_function_obj_invoker0\, boost::_bi::list2 >\, boost::_bi::value > >\, void>::invoke(boost::detail::function::function_buffer&)+0x6e) [0x7fde3313c11e]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::gui::TextButton::generate_click()+0x4e) [0x7fde335746ce]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::gui::TextButton::on_mouse_up(interactive::gui::Point2D const&\, int)+0x58) [0x7fde33574798]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::gui::TopLevel::on_mouse_up(interactive::gui::Point2D const&\, int)+0x93) [0x7fde3357f3e3]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::guiwrapper::GUIWrapper::generic_mouse_button_func(int\, bool\, int\, int)+0x28f) [0x7fde3378c1bf]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(boost::detail::function::void_function_obj_invoker0\, boost::_bi::list5 >\, boost::_bi::value\, boost::_bi::value\, boost::_bi::value\, boost::_bi::value > >\, void>::invoke(boost::detail::function::function_buffer&)+0x7c) [0x7fde3363248c]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::guiwrapper::GUIWrapper::enqueue_event(boost::function)+0x32) [0x7fde3378bb42]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::guiwrapper::glut::GLUTWrapper::glut_mouse_func(int\, int\, int\, int)+0x26e) [0x7fde336301ee]\n/lib/x86_64-linux-gnu/libglut.so.3(glutMainLoopEvent+0x507) [0x7fde30888af7]\n/lib/x86_64-linux-gnu/libglut.so.3(glutMainLoop+0x65) [0x7fde30888ff5]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(interactive::application::interactive_main(utility::vector1 > const&\, boost::function\, boost::function\, bool)+0xad3) [0x7fde3359c553]\ncmp-binary-db581aba9f1cb3cbef43044cbea3c66a/game_library.so(game::application::game_main(int\, char**\, char const*\, game::application::ExecutableKindEnum)+0x29c) [0x7fde32fb32ec]\n/home/svincent/Foldit/Foldit(run_library_main(std::string const&\, bool\, std::string const&\, int&\, int\, char**\, std::string&)+0x74) [0x402814]\n/home/svincent/Foldit/Foldit(main+0x10c) [0x40233c]\n/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3) [0x7fde3895b1e3]\n/home/svincent/Foldit/Foldit() [0x4026da]\n"
"build_id" : "20200413-d067627d3b-linux_x64"
"crash_id" : "7c4f6baa-f45b-426f-9046-da577557c72f"
"current_actions" : ""
"current_tool" : "Pull Mode"
"file" : "SIGSEGV:11"
"machine_id" : "59cc9335-7548-495a-a39a-c3737e48e54c"
"macro_id" : "204490"
"message" : "Segmentation Fault"
"player_id" : "3010"
"puzzle_id" : "2009656"
"puzzle_running_time" : "1339"
"running_time" : "1889.87"
"timestamp" : "1589572279"
}
verify: 03c9dc64906970ad51d63e7b108f3b66

(Fri, 05/15/2020 - 20:09  |  0 comments)


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