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| Vote | # | Title | Status | Type | Submitter | Replies | Last updated |
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| 100-0 | 408 solutions restorable in 409 | Closed | Bug | Tony Ori... | 06/05 10:32, Rav3n_pl |
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| 100-0 | 409 deadline | Closed | Bug | CharlieF... | 01/08 02:46, spmm |
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| 300-0 | 411 missing in 'off-line mode' | Closed | Bug | CharlieF... | 04/11 12:01, CharlieF... |
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| 200-0 | 413 errors | Closed | Bug | Skippysk8s | 04/09 12:17, LociOiling |
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| 100-0 | 494 is soooo sloooooow! | Closed | Bug | Susume | 06/05 10:55, Susume |
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| 500-0 | 555: residue # 16 locked in place | Closed | Bug | BootsMcGraw | 06/04 20:19, BootsMcGraw |
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| 500-0 | 583 Has cut tool, but move tool is gone in selection mode | Closed | Bug | Timo van... | 07/24 02:45, Timo van... |
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| 300-0 | 617 not mutable | Closed | Bug | mottiger | 08/13 17:08, jflat06 |
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| 500-0 | 665: Cannot create GUI recipe, client crashes! | Closed | Bug | bertro | 12/27 09:28, bertro |
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| 700-0 | 675 crashes | Closed | Bug | karstenw | 02/13 16:50, beta_helix |
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| 100-0 | 684 Secondary structure of the sugar is not M | Closed | Bug | Timo van... | 03/15 12:00, tamirh |
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| 700-0 | 688b: error reading: problem with non polymer bonds. | Closed | Bug | truestone | 10/02 18:02, BootsMcGraw |
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| 500-0 | 691 Restore Very Best broken | Closed | Bug | tyler0911 | 03/27 08:14, Bruno Ke... |
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| 100-0 | 7-3 Mass Mutate | Closed | Bug | dedfed | 06/21 10:57, brooney6366 |
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| 500-0 | 721 wiggle sticks too | Closed | Bug | jamiexq | 06/12 04:05, MurloW |
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| 300-0 | 759 won't open for me | Closed | Bug | smilingone | 08/08 10:30, katfish |
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| 700-0 | 884b shares crash client on load in selection interface, OK in original | Closed | Bug | LociOiling | 07/31 13:33, LociOiling |
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| 700-0 | 897 Hang | Closed | Bug | gitwut | 06/06 15:54, beta_helix |
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| 100-0 | 902 share loads higher | Closed | Bug | LociOiling | 07/31 13:15, LociOiling |
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| 600-0 | 915 appearing 3 times in group ranking | Closed | Bug | Bruno Ke... | 06/12 09:27, Bruno Ke... |
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